Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Cstf1Q99LC2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Cstf1Q99LC2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cstf1Q99LC2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cstf1Q99LC2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cstf1Q99LC2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Cstf1Q99LC2 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cstf1Q99LC2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cstf1Q99LC2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Gm5312-201ENSMUST00000203728 547 ntBASIC15.7■□□□□ 0.1
Cstf1Q99LC2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms