Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp1aQ921W0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Chmp1aQ921W0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1aQ921W0 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1aQ921W0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp1aQ921W0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp1aQ921W0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Gm44450-201ENSMUST00000199528 114 ntBASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Chmp1aQ921W0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Otx2os1-204ENSMUST00000227221 751 ntBASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Chmp1aQ921W0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms