Protein–RNA interactions for Protein: Q921V7

Slc44a3, Choline transporter-like protein 3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a3Q921V7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Slc44a3Q921V7 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Gm7977-201ENSMUST00000193787 748 ntBASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Slc44a3Q921V7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Slc44a3Q921V7 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc44a3Q921V7 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc44a3Q921V7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc44a3Q921V7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Slc44a3Q921V7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Slc44a3Q921V7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.57■□□□□ 0.08
Slc44a3Q921V7 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Slc44a3Q921V7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.56■□□□□ 0.08
Slc44a3Q921V7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms