Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Pcdha3Q91Y16 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Gm24589-201ENSMUST00000116692 94 ntBASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Birc2-201ENSMUST00000054878 378 ntBASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdha3Q91Y16 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdha3Q91Y16 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 App-207ENSMUST00000227737 2827 ntBASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Pcdha3Q91Y16 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Gm43347-201ENSMUST00000200226 580 ntBASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Gm34391-201ENSMUST00000203706 907 ntBASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Pcdha3Q91Y16 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms