Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Gm15372-201ENSMUST00000120729 834 ntBASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Gm7367-201ENSMUST00000057611 492 ntBASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb1Q91Y08 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb1Q91Y08 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm8825-201ENSMUST00000182565 998 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm4518-201ENSMUST00000182638 718 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb1Q91Y08 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.38■□□□□ 0.21
Pcdhb1Q91Y08 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms