Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gm6257-201ENSMUST00000163864 910 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gm4535-201ENSMUST00000182274 558 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gm6296-201ENSMUST00000222599 943 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Gm10355-201ENSMUST00000097146 517 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.74■□□□□ 0.27
Pcdhb2Q91Y00 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44357-201ENSMUST00000195897 142 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm19658-201ENSMUST00000196231 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44367-201ENSMUST00000196836 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44350-201ENSMUST00000197197 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44390-201ENSMUST00000197533 144 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44313-201ENSMUST00000198018 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44486-201ENSMUST00000198508 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44314-201ENSMUST00000199263 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44394-201ENSMUST00000199558 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44484-201ENSMUST00000199873 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44466-201ENSMUST00000200264 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Gm44359-201ENSMUST00000200671 138 ntBASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb2Q91Y00 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 AC133598.3-202ENSMUST00000224219 531 ntBASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb2Q91Y00 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb2Q91Y00 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms