Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb20Q91XZ9 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Ighv10-4-201ENSMUST00000193702 299 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm40332-201ENSMUST00000199847 938 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm18195-201ENSMUST00000207604 706 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gm36495-201ENSMUST00000221201 684 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 AC173345.3-201ENSMUST00000221245 1093 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Mzt1-203ENSMUST00000227948 952 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Haglr-201ENSMUST00000100000 2085 ntBASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhb20Q91XZ9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gm37709-201ENSMUST00000195074 600 ntBASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gm6312-201ENSMUST00000204060 1194 ntBASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhb20Q91XZ9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb20Q91XZ9 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb20Q91XZ9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhb20Q91XZ9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Gm5837-201ENSMUST00000191844 1369 ntBASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Gm13505-201ENSMUST00000121666 817 ntBASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 CT025642.1-201ENSMUST00000224734 1219 ntBASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhb20Q91XZ9 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm4535-201ENSMUST00000182274 558 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44357-201ENSMUST00000195897 142 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm19658-201ENSMUST00000196231 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44367-201ENSMUST00000196836 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44350-201ENSMUST00000197197 138 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44390-201ENSMUST00000197533 144 ntBASIC15.25■□□□□ 0.03
Pcdhb20Q91XZ9 Gm44313-201ENSMUST00000198018 138 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms