Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Rps4l-201ENSMUST00000071745 943 ntBASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhb22Q91XZ8 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb22Q91XZ8 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb22Q91XZ8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.54
Pcdhb22Q91XZ8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhb22Q91XZ8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhb22Q91XZ8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhb22Q91XZ8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhb22Q91XZ8 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 App-207ENSMUST00000227737 2827 ntBASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Prob1-201ENSMUST00000097619 3021 ntBASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gm13418-201ENSMUST00000119097 944 ntBASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gm6376-201ENSMUST00000209407 580 ntBASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhb22Q91XZ8 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms