Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Gm22189-201ENSMUST00000103822 86 ntBASIC18.65■□□□□ 0.58
StrcQ8VIM6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
StrcQ8VIM6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.65■□□□□ 0.58
StrcQ8VIM6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.64■□□□□ 0.58
StrcQ8VIM6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
StrcQ8VIM6 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
StrcQ8VIM6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
StrcQ8VIM6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm13517-201ENSMUST00000120782 1495 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Syt7-205ENSMUST00000224135 1557 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm11543-201ENSMUST00000120758 370 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm16026-204ENSMUST00000162652 683 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC18.64■□□□□ 0.57
StrcQ8VIM6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.64■□□□□ 0.57
StrcQ8VIM6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 AC132467.2-202ENSMUST00000227726 559 ntBASIC18.63■□□□□ 0.57
StrcQ8VIM6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Gm8597-201ENSMUST00000191525 1109 ntBASIC18.63■□□□□ 0.57
StrcQ8VIM6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
StrcQ8VIM6 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.62■□□□□ 0.57
StrcQ8VIM6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Gm15222-202ENSMUST00000228667 1726 ntBASIC18.62■□□□□ 0.57
StrcQ8VIM6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.62■□□□□ 0.57
StrcQ8VIM6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Gm45293-201ENSMUST00000209754 1812 ntBASIC18.62■□□□□ 0.57
StrcQ8VIM6 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
StrcQ8VIM6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 Gm15321-201ENSMUST00000121290 288 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 Gm12138-201ENSMUST00000122180 951 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 Gm44344-201ENSMUST00000200287 129 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.61■□□□□ 0.57
StrcQ8VIM6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
StrcQ8VIM6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
StrcQ8VIM6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.6■□□□□ 0.57
StrcQ8VIM6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
StrcQ8VIM6 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms