Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Trim60Q8VI40 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.34■□□□□ 0.21
Trim60Q8VI40 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Gm6257-201ENSMUST00000163864 910 ntBASIC16.34■□□□□ 0.21
Trim60Q8VI40 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Trim60Q8VI40 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim60Q8VI40 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Gm6433-201ENSMUST00000118634 875 ntBASIC16.33■□□□□ 0.2
Trim60Q8VI40 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim60Q8VI40 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim60Q8VI40 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim60Q8VI40 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms