Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Gm13223-201ENSMUST00000118609 747 ntBASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gm18489-201ENSMUST00000172565 551 ntBASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cspg4Q8VHY0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Gm6912-201ENSMUST00000117218 544 ntBASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cspg4Q8VHY0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Thap2-203ENSMUST00000218989 527 ntBASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cspg4Q8VHY0 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Gm28631-201ENSMUST00000190740 334 ntBASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cspg4Q8VHY0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm18889-201ENSMUST00000174284 929 ntBASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm18246-201ENSMUST00000221023 728 ntBASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cspg4Q8VHY0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms