Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdh18Q8VHR0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Gm30025-201ENSMUST00000218555 728 ntBASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.24■□□□□ 0.03
Pcdh18Q8VHR0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdh18Q8VHR0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdh18Q8VHR0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms