Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Gm6296-201ENSMUST00000222599 943 ntBASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rprd1aQ8VDS4 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gm6257-201ENSMUST00000163864 910 ntBASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rprd1aQ8VDS4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rprd1aQ8VDS4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rprd1aQ8VDS4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rprd1aQ8VDS4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rprd1aQ8VDS4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Rprd1aQ8VDS4 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rprd1aQ8VDS4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.19■□□□□ 0.18
Rprd1aQ8VDS4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rprd1aQ8VDS4 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rprd1aQ8VDS4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Rprd1aQ8VDS4 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Rprd1aQ8VDS4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms