Protein–RNA interactions for Protein: Q8VDF2

Uhrf1, E3 ubiquitin-protein ligase UHRF1, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uhrf1Q8VDF2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Uhrf1Q8VDF2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Uhrf1Q8VDF2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Uhrf1Q8VDF2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Gm18246-201ENSMUST00000221023 728 ntBASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Uhrf1Q8VDF2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Uhrf1Q8VDF2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Mir6990-201ENSMUST00000183724 91 ntBASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Gm27321-201ENSMUST00000185021 205 ntBASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Gm20553-201ENSMUST00000204205 844 ntBASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Uhrf1Q8VDF2 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Uhrf1Q8VDF2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms