Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Chmp7Q8R1T1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Gm17968-201ENSMUST00000194902 784 ntBASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Haglr-201ENSMUST00000100000 2085 ntBASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Chmp7Q8R1T1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Chmp7Q8R1T1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Chmp7Q8R1T1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Gm11025-201ENSMUST00000140773 466 ntBASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Chmp7Q8R1T1 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Gm14701-201ENSMUST00000117156 348 ntBASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Chmp7Q8R1T1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms