Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nudcd3Q8R1N4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nudcd3Q8R1N4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Nudcd3Q8R1N4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Gm13474-201ENSMUST00000122466 815 ntBASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Gm10566-201ENSMUST00000086739 996 ntBASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Nudcd3Q8R1N4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.78■□□□□ 0.12
Nudcd3Q8R1N4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms