Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Gm7488-201ENSMUST00000117148 684 ntBASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx54Q8K4L0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Gm5184-201ENSMUST00000220417 1702 ntBASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx54Q8K4L0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Gm9794-201ENSMUST00000202370 423 ntBASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Gm6888-201ENSMUST00000221983 706 ntBASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Syt7-205ENSMUST00000224135 1557 ntBASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 CT030684.1-201ENSMUST00000227292 914 ntBASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx54Q8K4L0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Gm13453-201ENSMUST00000118708 357 ntBASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Gm43433-201ENSMUST00000196573 481 ntBASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ddx54Q8K4L0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Gm10154-201ENSMUST00000084445 354 ntBASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Gm13517-201ENSMUST00000120782 1495 ntBASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ddx54Q8K4L0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 AC130829.1-201ENSMUST00000221548 494 ntBASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ddx54Q8K4L0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms