Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.38■□□□□ 0.05
Zc3h3Q8CHP0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Gm8410-201ENSMUST00000117225 605 ntBASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Gm15653-201ENSMUST00000119247 907 ntBASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Zc3h3Q8CHP0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Zc3h3Q8CHP0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Gm10154-201ENSMUST00000084445 354 ntBASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Zc3h3Q8CHP0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms