Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rp1l1Q8CGM2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Gm6912-201ENSMUST00000117218 544 ntBASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rp1l1Q8CGM2 Gm15487-201ENSMUST00000122373 465 ntBASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm7775-201ENSMUST00000218871 853 ntBASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm6888-201ENSMUST00000221983 706 ntBASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rp1l1Q8CGM2 Gm42934-201ENSMUST00000196920 1345 ntBASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Gm16215-201ENSMUST00000161990 637 ntBASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.21■□□□□ 0.19
Rp1l1Q8CGM2 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rp1l1Q8CGM2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rp1l1Q8CGM2 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rp1l1Q8CGM2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rp1l1Q8CGM2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Rp1l1Q8CGM2 Gm14722-201ENSMUST00000118943 689 ntBASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms