Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Gm8349-201ENSMUST00000182720 1003 ntBASIC19.51■□□□□ 0.71
Smc5Q8CG46 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.51■□□□□ 0.71
Smc5Q8CG46 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.5■□□□□ 0.71
Smc5Q8CG46 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.5■□□□□ 0.71
Smc5Q8CG46 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.5■□□□□ 0.71
Smc5Q8CG46 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smc5Q8CG46 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.49■□□□□ 0.71
Smc5Q8CG46 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.49■□□□□ 0.71
Smc5Q8CG46 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smc5Q8CG46 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smc5Q8CG46 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.48■□□□□ 0.71
Smc5Q8CG46 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Gm37736-201ENSMUST00000193564 2802 ntBASIC19.48■□□□□ 0.71
Smc5Q8CG46 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smc5Q8CG46 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.47■□□□□ 0.71
Smc5Q8CG46 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smc5Q8CG46 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms