Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Pcdhb7Q8CDY9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Gm45328-201ENSMUST00000210942 917 ntBASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdhb7Q8CDY9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Pcdhb7Q8CDY9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhb7Q8CDY9 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb7Q8CDY9 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms