Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ccdc38Q8CDN8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Asic1-205ENSMUST00000228185 1818 ntBASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ccdc38Q8CDN8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Gm13312-201ENSMUST00000119631 718 ntBASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 AA414768-201ENSMUST00000121924 1257 ntBASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ccdc38Q8CDN8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ccdc38Q8CDN8 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc38Q8CDN8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc38Q8CDN8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Ccdc38Q8CDN8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.52■□□□□ 0.39
Ccdc38Q8CDN8 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ccdc38Q8CDN8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Ccdc38Q8CDN8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms