Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vcpip1Q8CDG3 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Gm17971-201ENSMUST00000190239 806 ntBASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Vcpip1Q8CDG3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vcpip1Q8CDG3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Gm7461-201ENSMUST00000058918 827 ntBASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
Vcpip1Q8CDG3 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Vcpip1Q8CDG3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcpip1Q8CDG3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcpip1Q8CDG3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vcpip1Q8CDG3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.95■□□□□ 0.3
Vcpip1Q8CDG3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms