Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 AC158529.1-201ENSMUST00000223618 239 ntBASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 CT009713.10-202ENSMUST00000225734 696 ntBASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpn1Q8CCS6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 AC159006.1-201ENSMUST00000226396 258 ntBASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Pabpn1Q8CCS6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Gm7286-201ENSMUST00000182691 1007 ntBASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Gm43703-201ENSMUST00000200523 763 ntBASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpn1Q8CCS6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Gm5566-201ENSMUST00000116118 459 ntBASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpn1Q8CCS6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Gm8096-201ENSMUST00000209921 1591 ntBASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Gm9522-201ENSMUST00000182394 926 ntBASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Gm8318-201ENSMUST00000182954 872 ntBASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Gm27920-201ENSMUST00000183953 96 ntBASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Gm8399-201ENSMUST00000082300 1117 ntBASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Pabpn1Q8CCS6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Trav4d-2-201ENSMUST00000120914 335 ntBASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Gm9719-201ENSMUST00000162765 543 ntBASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 AC155286.1-201ENSMUST00000218632 448 ntBASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpn1Q8CCS6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
Pabpn1Q8CCS6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms