Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Ank2-226ENSMUST00000189368 339 ntBASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim9Q8C7M3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.4■□□□□ 0.38
Trim9Q8C7M3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
Trim9Q8C7M3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim9Q8C7M3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trim9Q8C7M3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Trim9Q8C7M3 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Gm18669-201ENSMUST00000216049 778 ntBASIC17.39■□□□□ 0.37
Trim9Q8C7M3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trim9Q8C7M3 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Gm7506-201ENSMUST00000207758 815 ntBASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trim9Q8C7M3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Gm4459-201ENSMUST00000118750 468 ntBASIC17.37■□□□□ 0.37
Trim9Q8C7M3 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Trim9Q8C7M3 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms