Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Gm11841-201ENSMUST00000117060 1963 ntBASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col6a6Q8C6K9 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Gm13365-201ENSMUST00000121188 973 ntBASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col6a6Q8C6K9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Col6a6Q8C6K9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms