Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rft1Q8C3B8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Actl10-202ENSMUST00000226583 1501 ntBASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Gm26039-201ENSMUST00000158152 144 ntBASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.11□□□□□ -0.15
Rft1Q8C3B8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rft1Q8C3B8 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 AA414768-201ENSMUST00000121924 1257 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm10566-201ENSMUST00000086739 996 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rft1Q8C3B8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Rft1Q8C3B8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms