Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.46■□□□□ 0.55
Usp44Q8C2S0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Usp44Q8C2S0 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Usp44Q8C2S0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Usp44Q8C2S0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
Usp44Q8C2S0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm7153-201ENSMUST00000117092 455 ntBASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm8344-201ENSMUST00000119813 856 ntBASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm4535-201ENSMUST00000182274 558 ntBASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Gm10355-201ENSMUST00000097146 517 ntBASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Usp44Q8C2S0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Gm13418-201ENSMUST00000119097 944 ntBASIC18.44■□□□□ 0.54
Usp44Q8C2S0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Usp44Q8C2S0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Usp44Q8C2S0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Usp44Q8C2S0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms