Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Gm7367-201ENSMUST00000057611 492 ntBASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gm27357-201ENSMUST00000183754 135 ntBASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Sh3rf3Q8C120 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Gm27867-201ENSMUST00000184778 125 ntBASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.43■□□□□ 0.22
Sh3rf3Q8C120 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Ank2-226ENSMUST00000189368 339 ntBASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Sh3rf3Q8C120 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sh3rf3Q8C120 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms