Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Gm15372-201ENSMUST00000120729 834 ntBASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Gm25745-201ENSMUST00000174945 133 ntBASIC16.28■□□□□ 0.2
Trub1Q8C0D0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Gm9172-201ENSMUST00000212092 954 ntBASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.28■□□□□ 0.2
Trub1Q8C0D0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm8825-201ENSMUST00000182565 998 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm4518-201ENSMUST00000182638 718 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trub1Q8C0D0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Trub1Q8C0D0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Gm17807-201ENSMUST00000186869 298 ntBASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trub1Q8C0D0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Gm12895-201ENSMUST00000122214 226 ntBASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trub1Q8C0D0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trub1Q8C0D0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms