Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcal1Q8BJL0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Smarcal1Q8BJL0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smarcal1Q8BJL0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smarcal1Q8BJL0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Gm8396-201ENSMUST00000057361 823 ntBASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Smarcal1Q8BJL0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Mir1895-201ENSMUST00000122615 79 ntBASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gm44492-201ENSMUST00000197012 141 ntBASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Smarcal1Q8BJL0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Smarcal1Q8BJL0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms