Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Asic1-205ENSMUST00000228185 1818 ntBASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Gm27389-201ENSMUST00000183622 195 ntBASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm21559-201ENSMUST00000220638 855 ntBASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm8587-201ENSMUST00000076538 843 ntBASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chmp2bQ8BJF9 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chmp2bQ8BJF9 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Gm15565-201ENSMUST00000118890 427 ntBASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chmp2bQ8BJF9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms