Protein–RNA interactions for Protein: Q8BIG4

Fbxo28, F-box only protein 28, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fbxo28Q8BIG4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Fbxo28Q8BIG4 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Gm7787-201ENSMUST00000216858 688 ntBASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 AC159295.1-201ENSMUST00000225326 940 ntBASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fbxo28Q8BIG4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fbxo28Q8BIG4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fbxo28Q8BIG4 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fbxo28Q8BIG4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.79■□□□□ 0.44
Fbxo28Q8BIG4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms