Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Ccdc40Q8BI79 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Gm23634-201ENSMUST00000175071 91 ntBASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Ccdc40Q8BI79 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Gm11950-201ENSMUST00000121615 838 ntBASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Gm6659-201ENSMUST00000174752 547 ntBASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ccdc40Q8BI79 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 AA414768-201ENSMUST00000121924 1257 ntBASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ccdc40Q8BI79 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc40Q8BI79 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc40Q8BI79 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.46■□□□□ 0.22
Ccdc40Q8BI79 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc40Q8BI79 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc40Q8BI79 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms