Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Gm34391-201ENSMUST00000203706 907 ntBASIC15.55■□□□□ 0.08
Ubp1Q811S7 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.55■□□□□ 0.08
Ubp1Q811S7 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ubp1Q811S7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.54■□□□□ 0.08
Ubp1Q811S7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ubp1Q811S7 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Gm43347-201ENSMUST00000200226 580 ntBASIC15.53■□□□□ 0.08
Ubp1Q811S7 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.53■□□□□ 0.08
Ubp1Q811S7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.53■□□□□ 0.08
Ubp1Q811S7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ubp1Q811S7 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Birc2-201ENSMUST00000054878 378 ntBASIC15.52■□□□□ 0.08
Ubp1Q811S7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ubp1Q811S7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubp1Q811S7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubp1Q811S7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubp1Q811S7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubp1Q811S7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ubp1Q811S7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms