Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Lrrtm4Q80XG9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Lrrtm4Q80XG9 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lrrtm4Q80XG9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Lrrtm4Q80XG9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Mir5131-201ENSMUST00000175426 93 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Gm19164-201ENSMUST00000210667 640 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.33■□□□□ 0.04
Lrrtm4Q80XG9 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Lrrtm4Q80XG9 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lrrtm4Q80XG9 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lrrtm4Q80XG9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Lrrtm4Q80XG9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms