Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prdm4Q80V63 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prdm4Q80V63 Gm38391-201ENSMUST00000191720 4069 ntBASIC16.47■□□□□ 0.23
Prdm4Q80V63 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prdm4Q80V63 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.47■□□□□ 0.23
Prdm4Q80V63 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Prdm4Q80V63 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Prdm4Q80V63 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Gm7638-201ENSMUST00000121348 967 ntBASIC16.46■□□□□ 0.23
Prdm4Q80V63 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.46■□□□□ 0.23
Prdm4Q80V63 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.46■□□□□ 0.23
Prdm4Q80V63 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Prdm4Q80V63 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Prdm4Q80V63 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Prdm4Q80V63 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.45■□□□□ 0.22
Prdm4Q80V63 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.45■□□□□ 0.22
Prdm4Q80V63 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Gm12085-201ENSMUST00000119263 940 ntBASIC16.45■□□□□ 0.22
Prdm4Q80V63 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Gm27463-201ENSMUST00000183569 57 ntBASIC16.45■□□□□ 0.22
Prdm4Q80V63 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.45■□□□□ 0.22
Prdm4Q80V63 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Prdm4Q80V63 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Efs-202ENSMUST00000227037 2540 ntBASIC16.44■□□□□ 0.22
Prdm4Q80V63 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Prdm4Q80V63 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Prdm4Q80V63 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms