Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rpp38Q80UU2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp38Q80UU2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Gm8344-201ENSMUST00000119813 856 ntBASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Gm34391-201ENSMUST00000203706 907 ntBASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp38Q80UU2 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Gm8097-201ENSMUST00000117903 829 ntBASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp38Q80UU2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Gm14722-201ENSMUST00000118943 689 ntBASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp38Q80UU2 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms