Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.52□□□□□ -0.25
Ubr5Q80TP3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Gm17150-201ENSMUST00000165577 381 ntBASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Gm27838-201ENSMUST00000184829 128 ntBASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Gm29667-201ENSMUST00000190817 490 ntBASIC13.51□□□□□ -0.25
Ubr5Q80TP3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ubr5Q80TP3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Gm23984-201ENSMUST00000157139 203 ntBASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ubr5Q80TP3 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm11425-201ENSMUST00000119608 498 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm15483-201ENSMUST00000120338 456 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm9396-201ENSMUST00000076703 567 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm12859-201ENSMUST00000117834 427 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Mir1938-201ENSMUST00000158746 100 ntBASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ubr5Q80TP3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ubr5Q80TP3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms