Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Gm25287-201ENSMUST00000103846 110 ntBASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Gm22918-201ENSMUST00000103855 110 ntBASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Rpap1Q80TE0 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Mir6977-201ENSMUST00000184960 64 ntBASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Arhgef33-209ENSMUST00000225223 714 ntBASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Rpap1Q80TE0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Gm13223-201ENSMUST00000118609 747 ntBASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 AC140375.2-201ENSMUST00000225283 584 ntBASIC24.29■■□□□ 1.48
Rpap1Q80TE0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Rpap1Q80TE0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Gm24158-201ENSMUST00000175263 71 ntBASIC24.28■■□□□ 1.48
Rpap1Q80TE0 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Gm37277-201ENSMUST00000194052 1111 ntBASIC24.28■■□□□ 1.48
Rpap1Q80TE0 AC125206.2-201ENSMUST00000217454 574 ntBASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Gm5779-201ENSMUST00000218467 910 ntBASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Rpap1Q80TE0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 AC160980.1-201ENSMUST00000224136 970 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 AC131710.1-201ENSMUST00000228336 990 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Gm7669-201ENSMUST00000210184 1603 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Gm12151-201ENSMUST00000121374 290 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Gm27437-201ENSMUST00000183429 107 ntBASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Rpap1Q80TE0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm43548-201ENSMUST00000197139 2353 ntBASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm27430-201ENSMUST00000184585 107 ntBASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gm44333-201ENSMUST00000197168 107 ntBASIC24.26■■□□□ 1.47
Rpap1Q80TE0 CT030684.1-201ENSMUST00000227292 914 ntBASIC24.26■■□□□ 1.47
Rpap1Q80TE0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Rpap1Q80TE0 AC025913.2-201ENSMUST00000220136 1766 ntBASIC24.26■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms