Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.23■□□□□ 0.35
Ush1gQ80T11 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ush1gQ80T11 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.22■□□□□ 0.35
Ush1gQ80T11 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.22■□□□□ 0.35
Ush1gQ80T11 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.22■□□□□ 0.35
Ush1gQ80T11 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ush1gQ80T11 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Gm4995-201ENSMUST00000117247 432 ntBASIC17.21■□□□□ 0.35
Ush1gQ80T11 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Mir3113-201ENSMUST00000175478 76 ntBASIC17.21■□□□□ 0.35
Ush1gQ80T11 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ush1gQ80T11 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Ush1gQ80T11 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Gm7063-201ENSMUST00000186840 981 ntBASIC17.2■□□□□ 0.34
Ush1gQ80T11 Gm10576-201ENSMUST00000191927 825 ntBASIC17.2■□□□□ 0.34
Ush1gQ80T11 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ush1gQ80T11 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Gm11764-201ENSMUST00000120221 623 ntBASIC17.19■□□□□ 0.34
Ush1gQ80T11 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 AC151286.1-201ENSMUST00000198489 145 ntBASIC17.19■□□□□ 0.34
Ush1gQ80T11 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC17.19■□□□□ 0.34
Ush1gQ80T11 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ush1gQ80T11 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms