Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.89□□□□□ -0.35
Vma21Q78T54 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Vma21Q78T54 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Gm7889-201ENSMUST00000185591 958 ntBASIC12.88□□□□□ -0.35
Vma21Q78T54 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.88□□□□□ -0.35
Vma21Q78T54 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.88□□□□□ -0.35
Vma21Q78T54 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Vma21Q78T54 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.87□□□□□ -0.35
Vma21Q78T54 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vma21Q78T54 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.87□□□□□ -0.35
Vma21Q78T54 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Gm10052-201ENSMUST00000168019 960 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.87□□□□□ -0.35
Vma21Q78T54 Gm7729-201ENSMUST00000050143 801 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Vma21Q78T54 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Asic1-205ENSMUST00000228185 1818 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.87□□□□□ -0.35
Vma21Q78T54 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Vma21Q78T54 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Vma21Q78T54 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
Vma21Q78T54 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Vma21Q78T54 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.86□□□□□ -0.35
Vma21Q78T54 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.86□□□□□ -0.35
Vma21Q78T54 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.86□□□□□ -0.35
Vma21Q78T54 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.86□□□□□ -0.35
Vma21Q78T54 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Vma21Q78T54 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC12.86□□□□□ -0.35
Vma21Q78T54 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Vma21Q78T54 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vma21Q78T54 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vma21Q78T54 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Vma21Q78T54 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms