Protein–RNA interactions for Protein: Q6ZQH8

Nup188, Nucleoporin NUP188 homolog, mousemouse

Predictions only

Length 1,759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup188Q6ZQH8 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Gm27437-201ENSMUST00000183429 107 ntBASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Gm2272-201ENSMUST00000194903 582 ntBASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Gm18057-201ENSMUST00000208220 503 ntBASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nup188Q6ZQH8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nup188Q6ZQH8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Gm2810-201ENSMUST00000118681 990 ntBASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nup188Q6ZQH8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Gm7653-201ENSMUST00000214567 508 ntBASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nup188Q6ZQH8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Gm13823-201ENSMUST00000119930 345 ntBASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nup188Q6ZQH8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nup188Q6ZQH8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nup188Q6ZQH8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms