Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gm9824-201ENSMUST00000178707 561 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gm43767-201ENSMUST00000198933 381 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Gm7730-201ENSMUST00000212486 454 ntBASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Scn10aQ6QIY3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Scn10aQ6QIY3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm25144-201ENSMUST00000179561 110 ntBASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Gm25352-201ENSMUST00000179815 110 ntBASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Mir8102-201ENSMUST00000184148 139 ntBASIC17.7■□□□□ 0.42
Scn10aQ6QIY3 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Scn10aQ6QIY3 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Gm16026-204ENSMUST00000162652 683 ntBASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Scn10aQ6QIY3 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Gm27920-201ENSMUST00000183953 96 ntBASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Scn10aQ6QIY3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Scn10aQ6QIY3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
Scn10aQ6QIY3 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms