Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Gm12527-201ENSMUST00000117967 564 ntBASIC15.02■□□□□ -0
Rnf220Q6PDX6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf220Q6PDX6 Gm17661-201ENSMUST00000170317 270 ntBASIC15.02■□□□□ -0
Rnf220Q6PDX6 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Rnf220Q6PDX6 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf220Q6PDX6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15□□□□□ -0.01
Rnf220Q6PDX6 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC15□□□□□ -0.01
Rnf220Q6PDX6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Gm9694-201ENSMUST00000193347 1189 ntBASIC15□□□□□ -0.01
Rnf220Q6PDX6 Gm37025-201ENSMUST00000195159 829 ntBASIC15□□□□□ -0.01
Rnf220Q6PDX6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rnf220Q6PDX6 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rnf220Q6PDX6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms