Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Gm25745-201ENSMUST00000174945 133 ntBASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Herc4Q6PAV2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Herc4Q6PAV2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.43■□□□□ 0.38
Herc4Q6PAV2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm9172-201ENSMUST00000212092 954 ntBASIC17.42■□□□□ 0.38
Herc4Q6PAV2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Herc4Q6PAV2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Herc4Q6PAV2 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Herc4Q6PAV2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms