Protein–RNA interactions for Protein: Q6P5D8

Smchd1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 2,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1Q6P5D8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC17.25■□□□□ 0.35
Smchd1Q6P5D8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smchd1Q6P5D8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gm12892-201ENSMUST00000117367 1146 ntBASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Gm14822-201ENSMUST00000122247 291 ntBASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smchd1Q6P5D8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 AC160980.1-201ENSMUST00000224136 970 ntBASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
Smchd1Q6P5D8 Gm23935-201ENSMUST00000102303 57 ntBASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Gm24270-201ENSMUST00000102326 57 ntBASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Gm24245-201ENSMUST00000157318 57 ntBASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Gm5177-201ENSMUST00000183092 997 ntBASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Gm45747-201ENSMUST00000212203 999 ntBASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smchd1Q6P5D8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms