Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Gm6345-202ENSMUST00000180900 204 ntBASIC17.7■□□□□ 0.42
Abcf1Q6P542 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Abcf1Q6P542 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
Abcf1Q6P542 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.69■□□□□ 0.42
Abcf1Q6P542 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Abcf1Q6P542 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Gm44450-201ENSMUST00000199528 114 ntBASIC17.68■□□□□ 0.42
Abcf1Q6P542 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.68■□□□□ 0.42
Abcf1Q6P542 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Abcf1Q6P542 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.67■□□□□ 0.42
Abcf1Q6P542 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Abcf1Q6P542 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Abcf1Q6P542 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms