Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Gm18032-201ENSMUST00000222541 538 ntBASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Krt39Q6IFX4 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Gm27389-201ENSMUST00000183622 195 ntBASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Gm44430-201ENSMUST00000203376 995 ntBASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Krt39Q6IFX4 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Gm10052-201ENSMUST00000168019 960 ntBASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Gm7977-201ENSMUST00000193787 748 ntBASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Gm7729-201ENSMUST00000050143 801 ntBASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.47■□□□□ 0.39
Krt39Q6IFX4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Krt39Q6IFX4 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Krt39Q6IFX4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt39Q6IFX4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt39Q6IFX4 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Krt39Q6IFX4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms