Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scaf8Q6DID3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Gm24158-201ENSMUST00000175263 71 ntBASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Gm10253-201ENSMUST00000194270 940 ntBASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Scaf8Q6DID3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Gm16198-201ENSMUST00000118766 670 ntBASIC18.34■□□□□ 0.53
Scaf8Q6DID3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scaf8Q6DID3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scaf8Q6DID3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22065-201ENSMUST00000103753 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22066-201ENSMUST00000103761 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24932-201ENSMUST00000103763 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24115-201ENSMUST00000103799 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22190-201ENSMUST00000103827 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22191-201ENSMUST00000103831 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24721-201ENSMUST00000103849 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm28018-201ENSMUST00000103869 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm26399-201ENSMUST00000103937 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25349-201ENSMUST00000177728 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm23616-201ENSMUST00000177797 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25871-201ENSMUST00000177816 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24752-201ENSMUST00000178240 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24496-201ENSMUST00000178287 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25649-201ENSMUST00000178476 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25548-201ENSMUST00000178681 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm23147-201ENSMUST00000178841 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm26095-201ENSMUST00000179270 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22171-201ENSMUST00000179283 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm23936-201ENSMUST00000179354 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm22619-201ENSMUST00000179516 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25255-201ENSMUST00000179579 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24755-201ENSMUST00000179691 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm26506-201ENSMUST00000179692 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm25086-201ENSMUST00000179931 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm23243-201ENSMUST00000180047 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24659-201ENSMUST00000180212 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm24169-201ENSMUST00000180244 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm23689-201ENSMUST00000180354 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm27359-201ENSMUST00000184153 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm27785-201ENSMUST00000184268 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm27466-201ENSMUST00000184396 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Gm27703-201ENSMUST00000184836 110 ntBASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scaf8Q6DID3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms